| Time | Topic : Details |
|---|---|
| 9:00 | Introductions and Startup |
| 9:30 | Working with Data |
| Storage best practices and UMRCP | |
| 11:00 | Break |
| 11:15 | Transferring data with Globus |
| Exercise 1 | |
| Intro to Great Lakes | |
| 1:00 | Day 1 concludes |
| 9:00 | Review and questions |
| 9:20 | Using the GreatLakes HPC |
| The Great Lakes HPC cluster | |
| Software management and Conda | |
| 11:00 | Break |
| 11:15 | Containerization with Docker/Singularity |
| Exercise 2 | |
| 1:00 | Day 2 concludes |
| 9:00 | Review |
| 9:10 | Workflow automation |
| Intro to workflow automation | |
| 11:00 | Break |
| Intro to Snakemake | |
| 12:45 | Wrap-up |
| 1:00 | Day 3 concludes |