| Time | Topic : Details |
|---|---|
| 9:00 | Introductions and Startup |
| 9:30 | Quick-Start |
| Overview and Warmup | |
| Sneak Peek of Great Lakes | |
| Data Priorities and Analysis Setup | |
| 11:00 | Break |
| 11:15 | UMich Resources |
| Raw Data, Compute/Storage Options, and UMRCP | |
| Great Lakes HPC | |
| Software Management | |
| Terminology - Compute Environment | |
| Software Management and Conda | |
| 1:00 | Day 1 concludes |
| 9:00 | Review and questions |
| 9:20 | Software Management |
| Software management and Conda | |
| Containerization with Docker/Singularity | |
| 11:00 | Break |
| 11:15 | Intro to workflow automation |
| 1:00 | Day 2 concludes |
| 9:00 | Review |
| 9:10 | Intro to Snakemake |
| 10:30 | Advanced Snakemake |
| 11:00 | Break |
| 11:15 | Transferring data with Globus |
| 12:45 | Wrap-up |
| 1:00 | Day 3 concludes |