Time | Topic : Details |
---|---|
9:00 | Introductions and Startup |
9:30 | Working with Data |
Storage best practices and UMRCP | |
11:00 | Break |
11:15 | Transferring data with Globus |
Exercise 1 | |
Intro to Great Lakes | |
1:00 | Day 1 concludes |
9:00 | Review and questions |
9:20 | Using the GreatLakes HPC |
The Great Lakes HPC cluster | |
Software management and Conda | |
11:00 | Break |
11:15 | Containerization with Docker/Singularity |
Exercise 2 | |
1:00 | Day 2 concludes |
9:00 | Review |
9:10 | Workflow automation |
Intro to workflow automation | |
11:00 | Break |
Intro to Snakemake | |
12:45 | Wrap-up |
1:00 | Day 3 concludes |